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Id: 49049
Status: new
Priority: 0/
Queue: Bio-Graphics

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Owner: Nobody in particular
Requestors: ybendana [...] gmail.com
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Subject: processed_transcript glyph does not display utrs
Date: Wed, 26 Aug 2009 17:32:14 -0700
To: bug-Bio-Graphics [...] rt.cpan.org
From: Yuri Titov Bendaña <ybendana [...] gmail.com>
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Hello, I believe I've run across a bug in the processed_transcript glyph. I'm using Bio::Graphics 1.982. I'm trying to display an mRNA containing only exons and CDS and it was not displaying the implied UTRs. I then noticed that the type() method was returning "type:source" so I made the following changes and it now works correctly: 37,38c37,38 < my @exons = grep {$_->type =~ /^exon/} @features; < my @cds = grep {$_->type =~ /^CDS/} @features; --- Show quoted text
> my @exons = grep {$_->type eq 'exon'} @features; > my @cds = grep {$_->type eq 'CDS'} @features;


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